BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B01SP1|AL426313
(760 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1496 0.0
>3x_Contig1334
Length = 7302
Score = 1496 bits (752), Expect = 0.0
Identities = 756/760 (99%)
Strand = Plus / Plus
Query: 1 atcattgcttcaagtkcagcatcaaggtccaaatcacctcgaggaccggcttgagtggtt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6042 atcattgcttcaagtgcagcatcaaggtccaaatcacctcgaggaccggcttgagtggtt 6101
Query: 61 gagaagtaccaaacgcaagtwcctggttcgcaaacttcggctcctgagcctaaaatcacc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6102 gagaagtaccaaacgcaagtacctggttcgcaaacttcggctcctgagcctaaaatcacc 6161
Query: 121 acctgtacggcttcaacgtttcctgtcttcaatgaatcaggtgggaacacgaccatagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6162 acctgtacggcttcaacgtttcctgtcttcaatgaatcaggtgggaacacgaccatagca 6221
Query: 181 gcactttctccttcactgaaccactgtgagcagtctttttccacaacacaagtgagccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6222 gcactttctccttcactgaaccactgtgagcagtctttttccacaacacaagtgagccta 6281
Query: 241 tgcacttcgtacttctggggaggaatgttaccgccattctggggatgttgggtaggggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6282 tgcacttcgtacttctggggaggaatgttaccgccattctggggatgttgggtaggggat 6341
Query: 301 gcgacaaccttttctgtgactcttactcttgaaccgtcttcaaaaaccgcagtctgggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342 gcgacaaccttttctgtgactcttactcttgaaccgtcttcaaaaaccgcagtctgggag 6401
Query: 361 ttcggatcgtatgataccaatttatgattgagtttataagtggcaccagccactgctgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6402 ttcggatcgtatgataccaatttatgattgagtttataagtggcaccagccactgctgct 6461
Query: 421 gatctgcagaatccttgagatagttctcccggcccaccatactttgaatataggactggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6462 gatctgcagaatccttgagatagttctcccggcccaccatactttgaatataggactggg 6521
Query: 481 aaaggtccgtaaacgtcaaaactagttaaaaatcttctgatccttgctaaaccttctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6522 aaaggtccgtaaacgtcaaaactagttaaaaatcttctgatccttgctaaaccttctggt 6581
Query: 541 gtcttagtatccagattacgacacataccaattgaaaatattaattcaaaaacttgaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6582 gtcttagtatccagattacgacacataccaattgaaaatattaattcaaaaacttgaggt 6641
Query: 601 ttttctagcttgaatttatcgactaggaaactagcaagtggctgttcagcgtatggtttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6642 ttttctagcttgaatttatcgactaggaaactagcaagtggctgttcagcgtatggtttc 6701
Query: 661 caaatgtccgtgcttttttcccattctagcacaaatttwatgaaacgcattaaattgcgt 720
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6702 caaatgtccgtgcttttttcccattctagcacaaatttaatgaaacgcattaaattgcgt 6761
Query: 721 ttcgtcatcaatggaagagtttkgtcagtaaatatttctt 760
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 6762 ttcgtcatcaatggaagagtttggtcagtaaatatttctt 6801
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4480
Number of Sequences: 1807
Number of extensions: 4480
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 760
length of database: 10,358,551
effective HSP length: 16
effective length of query: 744
effective length of database: 10,329,639
effective search space: 7685251416
effective search space used: 7685251416
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)